Gene

Unrestricted Access

Description

Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

Help

All NCBI databases and databanks, as wells as items on the NCBI Bookshelf, are covered in the NCBI Helf Manual.  A link is located in the footer at the bottom of each page or directly at http://www.ncbi.nlm.nih.gov/books/NBK3831/ 

User tools and features

Gene is accessed like any other Entrez database, namely by

  • querying on any word,
  • restricting the query term to a certain field, or
  • applying filters or properties

Users may perform the following types of searches (examples are provided at the bottom of the Gene home page): free text, chromosome & symbol, partial name & multiple species, associate sequence accession, gene name (symbol), publication (PubMed ID), gene ontology terms or identifiers, genes with short variants of medical interest, chromosome & species, and Enzyme Commission (EC) number.

Here are some representative queries:

Find genes by... Search text

free text

human muscular dystrophy

partial name and multiple species

transporter[title] AND ("Drosophila melanogaster"[orgn] OR "Mus musculus"[orgn])

chromosome and symbol

(II[chr] OR 2[chr]) AND adh*[sym]

associated sequence accession number

M11313[accn]

gene name (symbol)

BRCA1[sym]

publication (PubMed ID)

11331580[PMID]

Gene Ontology (GO) terms or identifiers

"cell adhesion"[GO]
10030[GO]

genes with variants of medical interest

gene_snp_clin[filter]

chromosome and species

Y[CHR] AND human[ORGN]

Enzyme Commission (EC) numbers

1.9.3.1[EC]

Dates covered

Most current information available.

Updating frequency

As new information is discovered.

Sources

PubMed, published journal literature, genetics/genomics databanks.

Type of coverage

Information from published journal literature, drug information monographs, and published reports. 

Producer/content provider

National Center for Biotechnology Information (NBCI)

Vendor/electronic presentation provider

National Center for Biotechnology Information (NCBI)